Differences

This shows you the differences between two versions of the page.

--- sas [2020/09/21 20:21]
root created
+++ sas [2020/10/02 20:27] (current)
root
@@ Line 1: / Line 1: @@
+  ====SAS====
+**Statistical Analysis System** is a statistical software suite developed by SAS Institute for data management, advanced analytics, multivariate analysis, business intelligence, criminal investigation, and predictive analytics.
+====Example Job====
+An example job is stored in ''/share/apps/SAS/example_job''.  Here is how you can run this job from your account through the scheduler.
+First copy the example directory files into your account.  Use ''SASexample'' as your directory name:
+<code>
+pinnacle-l1:pwolinsk:~$ mkdir SASexample
+pinnacle-l1:pwolinsk:~$ cp /share/apps/SAS/example_job/* SASexample/
+pinnacle-l1:pwolinsk:~$ cd SASexample
+pinnacle-l1:pwolinsk:~/SASexample$ cat sascode_example.sas
+libname home "~/SASexample" ;
+proc options option = work ;
+run;
+proc sort data = home.unsorteddata ;
+by  DirectorID DirBrdID ;
+run;
+pinnacle-l1:pwolinsk:~/SASexample$
+</code>
+Next using an editor of your choice, create a SLURM job script to run the example.  This is a short example.  1 node and 1 core for 5 minutes will be enough.  The script is named ''sas.slurm'' below:
+<code>
+pinnacle-l1:pwolinsk:~/SASexample$ cat sas.slurm
+#!/bin/bash
+#SBATCH -p comp01
+#SBATCH -t 5:00
+#SBATCH -N1 -n1
+cd ~/SASexample
+/share/apps/SAS/SASHome/SASFoundation/9.4/bin/sas_en sascode_example.sas
+pinnacle-l1:pwolinsk:~/SASexample$
+</code>
+Then submit the job into the queue and wait for it to run:
+<code>
+pinnacle-l1:pwolinsk:~/SASexample$ sbatch sas.slurm
+Submitted batch job 128940
+pinnacle-l1:pwolinsk:~/SASexample$ squeue -u pwolinsk
+             JOBID PARTITION     NAME     USER ST       TIME  NODES NODELIST(REASON)
+     comp01 sas.slur pwolinsk PD       0:00      1 (None)
+pinnacle-l1:pwolinsk:~/SASexample$
+pinnacle-l1:pwolinsk:~/SASexample$ squeue -u pwolinsk
+             JOBID PARTITION     NAME     USER ST       TIME  NODES NODELIST(REASON)
+pinnacle-l1:pwolinsk:~/SASexample$
+</code>
+When the job finishes look for output files:
+<code>
+pinnacle-l1:pwolinsk:~/SASexample$
+ ls -ltr
+total 208
+-rw-r--r--. 1 pwolinsk pwolinsk    134 Jul 22 11:52 sascode_example.sas
+-rw-r--r--. 1 pwolinsk pwolinsk 294912 Jul 22 12:03 unsorteddata.sas7bdat
+-rw-rw-r--. 1 pwolinsk pwolinsk    152 Jul 22 12:04 sas.slurm
+-rw-rw-r--. 1 pwolinsk pwolinsk      0 Jul 22 12:04 slurm-128940.out
+-rw-rw-r--. 1 pwolinsk pwolinsk   2937 Jul 22 12:04 sascode_example.log
+pinnacle-l1:pwolinsk:~/SASexample$
+</code>
+Contents of the sas log file:
+<code>
+pinnacle-l1:pwolinsk:~/SASexample$ cat sascode_example.log
+                                                          The SAS System                             12:23 Wednesday, July 22, 2020
+ERROR: Expecting page 1, got page -1 instead.
+ERROR: Page validation error while reading SASUSER.PROFILE.CATALOG.
+NOTE: Unable to open SASUSER.PROFILE. WORK.PROFILE will be opened instead.
+NOTE: All profile changes will be lost at the end of the session.
+NOTE: Copyright (c) 2016 by SAS Institute Inc., Cary, NC, USA.
+NOTE: SAS (r) Proprietary Software 9.4 (TS1M6)
+      Licensed to UNIV OF AR - FAYETTEVILLE CAMPUS - SFA - T&R, Site 70215900.
+NOTE: This session is executing on the Linux 3.10.0-957.10.1.el7.x86_64 (LIN X64) platform.
+NOTE: Analytical products:
+      SAS/STAT 15.1
+      SAS/ETS 15.1
+      SAS/IML 15.1
+NOTE: Additional host information:
+ Linux LIN X64 3.10.0-957.10.1.el7.x86_64 #1 SMP Mon Mar 18 15:06:45 UTC 2019 x86_64 CentOS Linux release 7.8.2003 (Core)
+You are running SAS 9. Some SAS 8 files will be automatically converted
+by the V9 engine; others are incompatible.  Please see
+http://support.sas.com/rnd/migration/planning/platform/64bit.html
+PROC MIGRATE will preserve current SAS file attributes and is
+recommended for converting all your SAS libraries from any
+SAS 8 release to SAS 9.  For details and examples, please see
+http://support.sas.com/rnd/migration/index.html
+This message is contained in the SAS news file, and is presented upon
+initialization.  Edit the file "news" in the "misc/base" directory to
+display site-specific news and information in the program log.
+The command line option "-nonews" will prevent this display.
+NOTE: SAS initialization used:
+      real time           0.08 seconds
+      cpu time            0.02 seconds
+          libname home "~/SASexample" ;
+NOTE: Libref HOME was successfully assigned as follows:
+      Engine:        V9
+      Physical Name: /home/pwolinsk/SASexample
+
+          proc options option = work ;
+          run;
+    SAS (r) Proprietary Software Release 9.4  TS1M6
+ WORK=/tmp/SAS_work7DA900029444_c1612
+                   Specifies the libref or location of the Work library.
+NOTE: PROCEDURE OPTIONS used (Total process time):
+      real time           0.00 seconds
+      cpu time            0.00 seconds
+                                                          The SAS System                             12:23 Wednesday, July 22, 2020
+
+          proc sort data = home.unsorteddata ;
+          by  DirectorID DirBrdID ;
+          run;
+NOTE: There were 100 observations read from the data set HOME.UNSORTEDDATA.
+NOTE: The data set HOME.UNSORTEDDATA has 100 observations and 18 variables.
+NOTE: PROCEDURE SORT used (Total process time):
+      real time           0.01 seconds
+      cpu time            0.01 seconds
+ERROR: Errors printed on page 1.
+NOTE: SAS Institute Inc., SAS Campus Drive, Cary, NC USA 27513-2414
+NOTE: The SAS System used:
+      real time           0.10 seconds
+      cpu time            0.04 seconds
+pinnacle-l1:pwolinsk:~/SASexample$
+</code>

Arkansas High Performace Computing Center [hpcwiki]

User Tools

Site Tools

Differences

Page Tools