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qe [2020/03/06 22:23]
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qe [2020/03/06 23:22] (current)
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 ===qe/quantum espresso=== ===qe/quantum espresso===
  
-With version 6.5 from github:+With version 6.5 from github,building on trestles to use the oldest environment for xHOST: 
 + 
 +<code> 
 +module load intel/19.0.5 impi/19.0.5 mkl/19.0.5 
 +$ ./install/configure 
 +MPIF90=mpiifort F90=ifort F77=ifort FC=ifort CC=icc 
 +SCALAPACK_LIBS="-lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64" 
 +LAPACK_LIBS="-lmkl_lapack95_lp64 -lmkl_blas95_lp64" 
 +BLAS_LIBS="-lmkl_intel_lp64  -lmkl_intel_thread -lmkl_core"
 +FFT_LIBS="-L${MKL_ROOT}/interfaces/fftw3xf -lfftw3xf_intel" 
 +FCFLAGS="-O3 -xHOST -axsse4.2,AVX,CORE-AVX512 -assume byterecl"
 +CCFLAGS="-O3 -xHOST -axsse4.2,AVX,CORE-AVX512 -assume bytrerecl \ 
 +-D__INTEL -D__GNUC__ -D__FFTW3 -D__MPI -D__PARA -D__SCALAPACK" 
 +--with-hdf5=/share/apps/hdf5/1.10.5/intel/impi 
 +--with-scalapack=intel --enable-openmp --enable-parallel \ 
 +--prefix=/share/apps/espresso/espresso-6.5-intel-impi-mkl 
 +make pw 
 +make all 
 +</code> 
 +Using the AUSURF112 benchmark, running on single nodes of trestles and razor, and last a comparison run with qe 6.1: 
 +<code> 
 +OMP_NUM_THREADS=1 mpirun -np 32 /scrfs/apps/espresso/espresso-6.5-intel-mkl-impi/bin/pw.x -npools 1 <ausurf.in 
 +OMP_NUM_THREADS=1 mpirun -np 32 /scrfs/apps/espresso/espresso-6.5-intel-mkl-impi/bin/pw.x -npools 2 <ausurf.in 
 +OMP_NUM_THREADS=1 mpirun -np 16 /scrfs/apps/espresso/espresso-6.5-intel-mkl-impi/bin/pw.x -npools 1 <ausurf.in 
 +OMP_NUM_THREADS=1 mpirun -np 16 /scrfs/apps/espresso/espresso-6.5-intel-mkl-impi/bin/pw.x -npools 2 <ausurf.in 
 +OMP_NUM_THREADS=2 mpirun -np  8 /scrfs/apps/espresso/espresso-6.5-intel-mkl-impi/bin/pw.x -npools 1 <ausurf.in 
 +mpirun -np 16 /share/apps/espresso/qe-6.1-intel-mkl-impi/bin/pw.x -npools 1 <ausurf.in 
 +</code> 
 +with results showing 6.5 much improved over 6.1. 
 +<csv> 
 +Run,System, OMP, MPI, npools, walltime 
 +1,trestles, 1, 32, 1, 867 
 +2,trestles, 1, 32, 2, 837 
 +3,razor, 1, 16, 1, 690 
 +4,razor, 1, 16, 2, did not run 
 +5,razor, 2, 8, 1, 1073 
 +6,razor qe 6.1,1,16,1,1612 
 +</csv>
  
-module load intel/19.0.5 impi/19.0.5 mkl/19.05 
  
qe.1583533397.txt.gz · Last modified: 2020/03/06 22:23 by root