Arkansas High Performace Computing Center [hpcwiki]

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===== Python Software Catalog =====
Not including OpenHPC and other RPM software in /opt and R/python/perl modules
<csv>
Conda_3.7.3_environment,description,extra_modules_needed
base,,mkl
R-CARBayes,CARBayes 5.2/r 3.5.1,
aTRAM,atram 2.3.4/bowtie2 2.4.1,mkl
bioconda(for python 2.7),deprecated:mostly like bionconda3-el7,mkl
bioconda3(for trestles Centos 6),deprecated:mostly like bionconda3-el7,mkl
bioconda3-el7,many bioconda modules/orthofinder/blast/cutadapt 3.0/r/bowtie 2.4.2/raxml 8.2.12/raxml-ng 1.0.1,cuda/mkl/gcc8
boltztrap2,boltztrap2 20.7.1,
bonito,bonito 0.3.6/megalodon 2.2.10,cuda/mkl/gcc8
cutadapt,cutadapt 3.2,
flair_env,flair.py/r 3.5.1/raxml
ppa2,phylophlan 3.0/raxml 8.2.12,mkl,
pytorch_gpu,pytorch 1.7.1,cuda/mkl
qiime2-2020.2,qiime2 2020.2.0/raxml 8.2.12,
rapids-0.16,rapids/rapids-xgboost 0.16.0,cuda
rapids-gpu,rapids-xgboost 0.15.1,cuda/mkl
sam,aws-sam-cli 1.15.0,
tbprofiler,tb-profiler 2.8.12/bowtie2,
tf1(cpu version),tensorflow-mkl 1.14.0,mkl
tf_gpu,tensorflow-gpu 1.14.0/openmm 7.5.0,cuda/mkl/gcc8
theano-env,theano 1.0.4,mkl
</csv>

Arkansas High Performace Computing Center [hpcwiki]

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